Stem-loop eca-mir-652

Accession

MI0012982

Description

Equus caballus eca-mir-652 precursor miRNA

Gene family

MIPF0000333; mir-652

Sequence

44 reads, 7 reads per million, 1 experiments

acgaauggcuaugcacugcacaacccuaggagagggugccauucacauagacuauaauugAAUGGCGCCACUAGGGUUGUGcagugcacaaccuacac
......((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...)).....

Structure

acgaau  cua                  gagag           ca  g 
      gg   ugcacugcacaacccuag     ggugccauuca  ua a
      ||   ||||||||||||||||||     |||||||||||  || c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu  au u
-cacau  aac                  ----A           ua  a 

Annotation confidence Not enough data

Genome context

chrX: 86921316-86921413 [+]

Mature eca-miR-652

• Accession: MIMAT0013240
• Description: Equus caballus eca-miR-652 mature miRNA
• Sequence: 61 - AAUGGCGCCACUAGGGUUGUG - 81
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131