miRBase entry: eca-mir-767

Stem-loop eca-mir-767


Accession
MI0012986
Description
Equus caballus eca-mir-767 precursor miRNA
Gene family
MIPF0000552; mir-767


Sequence

99 reads, 15 reads per million, 1 experiments
gcuuuuguauuauagguuuuugcucaUGCACCAUGGUUGUCUGAGCAUGcagcaugcuugUCUGCUCAUACUCCAUGGUUCCUgagcaggaaccuucauugccuacug
......(((....(((((((((((((.(.(((((((..((.((((((.((((.....)))).)))))).)).))))))).).)))))))))))))....)))......

Structure
gcuuuu   uuau             U C       UU  C      U    c 
      gua    agguuuuugcuca G ACCAUGG  GU UGAGCA Gcag a
      |||    ||||||||||||| | |||||||  || |||||| |||| u
      cgu    uccaaggacgagU C UGGUACC  CA ACUCGU Uguu g
gucauc   uacu             C U       -U  U      C    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 120988447-120988554 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-767
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-767-5p

Accession MIMAT0013245
Description Equus caballus eca-miR-767-5p mature miRNA
Sequence 27 - UGCACCAUGGUUGUCUGAGCAUG - 49
Evidence not_experimental

Mature eca-miR-767-3p

Accession MIMAT0013246
Description Equus caballus eca-miR-767-3p mature miRNA
Sequence 61 - UCUGCUCAUACUCCAUGGUUCCU - 83
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131