Stem-loop ola-mir-430a-1

Accession

MI0013008

Description

Oryzias latipes ola-mir-430a-1 precursor miRNA

Gene family

MIPF0000003; mir-430

Literature search

3 open access papers mention ola-mir-430a-1
(9 sentences)

Sequence

ggacauaaagaugaccuugacacaggcacugacucuuucuucuuuguagUAAGUGCUACUUGUUGGGGUAuuuuuggugucc
((((((.((((..(((((((((..((((((.((((..........).))).))))))...)))))))))..)))).))))))

Structure

      a    ug         -ca      g   - uuuc 
ggacau aaga  accuugaca   ggcacu acu c    u
|||||| ||||  |||||||||   |||||| ||| |     
ccugug uuuu  UGGGGUUGU   UCGUGA Uga g    u
      g    uA         UCA      A   u uuuc 

Annotation confidence Not enough data

Genome context

4: 6743-6824 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ola-mir-430a-1

Mature ola-miR-430a

• Accession: MIMAT0013804
• Description: Oryzias latipes ola-miR-430a mature miRNA
• Sequence: 50 - UAAGUGCUACUUGUUGGGGUA - 70
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49