miRBase entry: ola-mir-430b-1

Stem-loop ola-mir-430b-1


Accession
MI0013010
Description
Oryzias latipes ola-mir-430b-1 precursor miRNA
Gene family
MIPF0000003; mir-430

Literature search
3 open access papers mention ola-mir-430b-1
(10 sentences)

Sequence

ggacauaaagaugaccuugacacaggcacugacuuuuucuucuuuguagUAAGUGCUACAUGUUGGGGUAAuuuuggugucc
((((((.(((((.(((((((((..((((((.(((.............))).))))))...))))))))).))))).))))))

Structure
      a     g         -ca      g   uuuuc 
ggacau aagau accuugaca   ggcacu acu     u
|||||| ||||| |||||||||   |||||| |||     u
ccugug uuuuA UGGGGUUGU   UCGUGA Uga     c
      g     A         ACA      A   uguuu 


Annotation confidence Not enough data
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Genome context
4: 7977-8058 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ola-mir-430b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ola-miR-430b

Accession MIMAT0013806
Description Oryzias latipes ola-miR-430b mature miRNA
Sequence 50 - UAAGUGCUACAUGUUGGGGUAA - 71
Evidence experimental
in-situ [1], Northern [1]

References

  1. PubMed ID: 19770025
    Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
    "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
    "Gene (2010) 449:41-49