miRBase entry: ola-mir-430c-4

Stem-loop ola-mir-430c-4


Accession
MI0013015
Description
Oryzias latipes ola-mir-430c-4 precursor miRNA
Gene family
MIPF0000003; mir-430

Literature search
3 open access papers mention ola-mir-430c-4
(10 sentences)

Sequence

ccuuucuuagcacuauuuccugaccaaaacauaccaacacnnnnnnnnnnucuuugcagUAAGUGCUACAUGUUGGGGUAGucuuggugucuagcaa
......(((((((((....(((.((..(((((.....(((......................)))....)))))..)))))...))))).))))...

Structure
ccuuuc    -     uuuc   a  aa     accaa   nnnnnnnnnn 
      uuag cacua    cug cc  aacau     cac          u
      |||| |||||    ||| ||  |||||     |||           
      gauc guggu    GAU GG  UUGUA     GUG          c
---aac    u     -ucu   -  GG     -CAUC   AAUgacguuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ola-miR-430c

Accession MIMAT0013805
Description Oryzias latipes ola-miR-430c mature miRNA
Sequence 60 - UAAGUGCUACAUGUUGGGGUAG - 81
Evidence experimental
in-situ [1], Northern [1]

References

  1. PubMed ID: 19770025
    Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
    "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
    "Gene (2010) 449:41-49