miRBase entry: bta-mir-2886

Stem-loop bta-mir-2886


Accession
MI0013059
Description
Bos taurus bta-mir-2886 precursor miRNA


Sequence

ccggccuacuuggggcuccgagccgcugccgcauacauuAGCGCCGCCGGCCGCACCgccgucaccuucagcgcu
..(((((...((((((..((.((((.((.(((........))).)).))))))....))).))).....)).)))

Structure
cc   -  --acu   -   --uc  a    c  c   aua 
  ggc cu     ugg ggc    cg gccg ug cgc   c
  ||| ||     ||| |||    || |||| || |||    
  ucg ga     acu ccg    GC CGGC GC GCG   a
--   c  cuucc   g   CCAC  -    C  C   Auu 


Annotation confidence Not enough data
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Genome context
chr19: 38707493-38707567 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2886
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2886

Accession MIMAT0013844
Description Bos taurus bta-miR-2886 mature miRNA
Sequence 40 - AGCGCCGCCGGCCGCACC - 57
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19765282
    Identification and characterization of miRNAs expressed in the bovine ovary
    Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
    BMC Genomics (2009) 10:443