Accession
MI0013092
Description
Sus scrofa
ssc-mir-30e precursor miRNA
Literature search
21 open access papers mention ssc-mir-30e
(60 sentences)
(60 sentences)
Sequence
4329
reads,
1042
reads per million, 13 experiments
uuugccacUGUAAACAUCCUUGACUGGAAGCUgugaggcguucccaggagCUUUCAGUCGGAUGUUUACAGCggcaggcu
.(((((.((((((((((((..(((((((((((.(..((....))..).))))))))))))))))))))))).)))))...
.(((((.((((((((((((..(((((((((((.(..((....))..).))))))))))))))))))))))).)))))...
Structure
--u a UU g ga c uugcc cUGUAAACAUCC GACUGGAAGCU u gg g ||||| |||||||||||| ||||||||||| | || gacgg GACAUUUGUAGG CUGACUUUCga g cc u ucg C -- g ac u
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr6: 157476655-157476734 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-30e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-30e-5p
| Accession | MIMAT0013872 |
| Description | Sus scrofa ssc-miR-30e-5p mature miRNA |
| Sequence | 9 - UGUAAACAUCCUUGACUGGAAGCU - 32 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
Mature ssc-miR-30e-3p
| Accession | MIMAT0013873 |
| Description | Sus scrofa ssc-miR-30e-3p mature miRNA |
| Sequence | 51 - CUUUCAGUCGGAUGUUUACAGC - 72 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
References
|
