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miRBase |
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Stem-loop sequence ssc-mir-143 |
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Accession | MI0013098 (change log) | |||||
Description | Sus scrofa miR-143 stem-loop | |||||
Gene family | MIPF0000094; mir-143 | |||||
Literature search |
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31 open access papers mention ssc-mir-143 | |||||
Stem-loop |
g c ag g g g u - ag 5' uc ccc cc gag ugcagugcu caucuc gg uc c || ||| || ||| ||||||||| |||||| || || 3' ag ggg gg cuc augucacga guagag cu ag u - a aa g g a u g gg |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-143-5p |
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Accession | MIMAT0017374 |
Sequence |
15 - ggugcagugcugcaucucugg - 35 |
Deep sequencing | 1685 reads, 15 experiments |
Evidence | experimental; Illumina [2,4-5] |
Mature sequence ssc-miR-143-3p |
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Accession | MIMAT0013879 |
Previous IDs | ssc-miR-143 |
Sequence |
49 - ugagaugaagcacuguagcuc - 69 |
Deep sequencing | 668836 reads, 15 experiments |
Evidence | experimental; Illumina [1-2,4-5], cloned [3] |
References |
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1 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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2 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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3 |
PMID:20180025
"Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue"
Mol Biol Rep. 37:3567-3574(2010).
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4 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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5 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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