miRBase entry: ssc-mir-361

Stem-loop ssc-mir-361


Accession
MI0013145
Description
Sus scrofa ssc-mir-361 precursor miRNA
Gene family
MIPF0000172; mir-361

Literature search
4 open access papers mention ssc-mir-361
(65 sentences)

Sequence

382 reads, 139 reads per million, 10 experiments
ggagcUUAUCAGAAUCUCCAGGGGUACuuauaauuugaaaaaguCCCCCAGGUGUGAUUCUGAUUUGCuuccuccuccuc
(((((..(((((((((.((.((((.((((...........)))).)))).))...)))))))))..))))).........

Structure
---------     UU         --U  A    U    auaa 
         ggagc  AUCAGAAUC   CC GGGG ACuu    u
         |||||  |||||||||   || |||| ||||    u
         cuuCG  UAGUCUUAG   GG CCCC ugaa    u
cuccuccuc     UU         UGU  A    C    aaag 


Annotation confidence Not enough data
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Genome context
chrX: 78804780-78804859 [-]

Database links

Mature ssc-miR-361-5p

Accession MIMAT0013933
Description Sus scrofa ssc-miR-361-5p mature miRNA
Sequence 6 - UUAUCAGAAUCUCCAGGGGUAC - 27
Evidence experimental
Illumina [1-3]

Mature ssc-miR-361-3p

Accession MIMAT0013934
Description Sus scrofa ssc-miR-361-3p mature miRNA
Sequence 45 - CCCCCAGGUGUGAUUCUGAUUUGC - 68
Evidence experimental
Illumina [1-3]

References

  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  3. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100