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miRBase |
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Stem-loop sequence zma-MIR169o |
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Accession | MI0013202 (change log) | ||||
Description | Zea mays miR169o stem-loop | ||||
Gene family | MIPF0000012; MIR169_1 | ||||
Literature search |
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32 open access papers mention zma-MIR169o | ||||
Stem-loop |
--------------------guagccaagaaugacuugccu g ------- - g - uu c g g 5' au cacgcc cuc u uug gcag ccguc g ca c || |||||| ||| | ||| |||| ||||| | || 3' ua gugcgg gag g aac cguu ggcag c gu c accgaucgguucuucuggacggcuacgucgguguaacguag g cguuuuu u g a -- - g a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR169o-5p |
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Accession | MIMAT0013991 |
Previous IDs | zma-miR169o |
Sequence |
2 - uagccaagaaugacuugccua - 22 |
Deep sequencing | 311 reads, 4 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence zma-miR169o-3p |
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Accession | MIMAT0015326 |
Previous IDs | zma-miR169o* |
Sequence |
117 - ggcaggucuucuuggcuagc - 136 |
Deep sequencing | 6 reads, 3 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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