Stem-loop zma-MIR169p

Accession

MI0013203

Description

Zea mays zma-MIR169p precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

30 open access papers mention zma-MIR169p
(221 sentences)

Sequence

821 reads, 1338 reads per million, 138 experiments

gUAGCCAAGGAUGACUUGCCGGcauuauauuucuuggcccgccGGCAAGUCAUCUGGGGCUACGc
((((((..(((((((((((((((....((.....))....)))))))))))))))..))))))..

Structure

--      AA               auua  u 
  gUAGCC  GGAUGACUUGCCGGc    ua u
  ||||||  |||||||||||||||    || u
  CAUCGG  UCUACUGAACGGccg    gu c
cG      GG               cccg  u 

Annotation confidence Not enough data

Genome context

chr7: 114375728-114375792 [-]

Mature zma-miR169p-5p

• Accession: MIMAT0013992
• Description: Zea mays zma-miR169p-5p mature miRNA
• Sequence: 2 - UAGCCAAGGAUGACUUGCCGG - 22
• Evidence: experimental ; Illumina [1]

Mature zma-miR169p-3p

• Accession: MIMAT0015327
• Description: Zea mays zma-miR169p-3p mature miRNA
• Sequence: 44 - GGCAAGUCAUCUGGGGCUACG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716