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miRBase |
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Stem-loop sequence zma-MIR399i |
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Accession | MI0013235 (change log) | |||||
Description | Zea mays miR399i stem-loop | |||||
Gene family | MIPF0000015; MIR399 | |||||
Literature search |
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22 open access papers mention zma-MIR399i | |||||
Stem-loop |
-- u c gag cgacu - ac c 5' ag gcggcucuccu uggcau ggcg gaga ggc gaa a || ||||||||||| |||||| |||| |||| ||| ||| 3' uc cguugagagga accgua ccgu cucu ccg cuu g cg c a --a ----c u gu u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence zma-miR399i-5p |
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Accession | MIMAT0015358 |
Previous IDs | zma-miR399i* |
Sequence |
2 - gugcggcucuccucuggcaug - 22 |
Deep sequencing | 776 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence zma-miR399i-3p |
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Accession | MIMAT0014024 |
Previous IDs | zma-miR399i |
Sequence |
70 - ugccaaaggagaguugcccug - 90 |
Deep sequencing | 656 reads, 5 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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References |
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1 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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