Stem-loop osa-MIR2920

Accession

MI0013262

Description

Oryza sativa osa-MIR2920 precursor miRNA

Sequence

caagaggguuccuaaaauauuauagacaaaacaagucacuacauaauacauauaagcagauacagaaacaaguuuauuguccuauaccaaauuucaaaauucAAACAACAAUAUAACAUUUCAAAuauuagcuaguuuacauuggguauucaacuauucaauaaacaccguggauaccgcauauacuaucaccauuuggccaauggccag
...(.((..(((............(((.......))).....(((..(((.((((((..............)))))))))..))).................................................(((((..(((((((......)))))))))))).....)))..)).)................(((((...))))).

Structure

---------------------------caa a  gu   --------------------------------------------------------uaaaauauuauagacaaaacaagucacuac   au   u      agauac 
                              g gg  ucc                                                                                      aua  aca auaagc      a
                              | ||  |||                                                                                      |||  ||| ||||||       
                              c cc  agg                                                                                      uau  ugu uauuug      g
gaccgguaaccgguuuaccacuaucauaua g  au   ugccacaaauaacuuaucaacuuauggguuacauuugaucgauuauAAACUUUACAAUAUAACAACAAAcuuaaaacuuuaaacca   cc   -      aacaaa 

Annotation confidence Not enough data

Genome context

Chr7: 28405506-28405715 [-]

Mature osa-miR2920

• Accession: MIMAT0014051
• Description: Oryza sativa osa-miR2920 mature miRNA
• Sequence: 103 - AAACAACAAUAUAACAUUUCAAA - 125
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20131478
   Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses
   "Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK"
   "Mol Genet Genomics (2009) 282:463-474