miRBase entry: osa-MIR2931

Stem-loop osa-MIR2931


Accession
MI0013273
Description
Oryza sativa osa-MIR2931 precursor miRNA


Sequence

4 reads, 4 reads per million, 2 experiments
aaaaaacaauguuugccacuucuuuauuuuauugaugcauuuauguCUUUAUUGUUGAUGUCAAAAauuuaucgaucagcgguugcauugaaaauuuagcuugaaguuauauauauauugauauacuugugguacaauuaugaacccccuccau
......((((((.....(((((.(((..((.((((((((...........(((((((((...............))))))))))))))))).))..)))...))))).......))))))..........(((.((....)).)))........

Structure
----------------------------aaaaaa      --uugcc     --u   uu  a        uuuauguCUUU         GUCAAA 
                                  caaugu       acuuc   uua  uu uugaugca           AUUGUUGAU      A
                                  ||||||       |||||   |||  || ||||||||           |||||||||      a
                                  guuaua       ugaag   gau  aa aguuacgu           uggcgacua      u
uaccucccccaaguauuaacaugguguucauaua      uauauau     uuc   uu  a        -----------         gcuauu 


Annotation confidence Not enough data
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Genome context
Chr6: 1893771-1893924 [+]

Database links

Mature osa-miR2931

Accession MIMAT0014062
Description Oryza sativa osa-miR2931 mature miRNA
Sequence 47 - CUUUAUUGUUGAUGUCAAAA - 66
Evidence experimental
cloned [1]

References

  1. PubMed ID: 20131478
    Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses
    "Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK"
    "Mol Genet Genomics (2009) 282:463-474