Stem-loop rlcv-mir-rL1-32

Accession

MI0013291

Description

Rhesus lymphocryptovirus rlcv-mir-rL1-32 precursor miRNA

Gene family

MIPF0000959; mir-BART14

Sequence

ugguguccugUAACUUACUACUGCCGCUUUACAuaacguagcuugUAAAUGCGAGCAGUAGUAGGCGUCuggacgcua
((((((((.(...((((((((((((((((((((..........)))))).))).)))))))))))...).))))))))

Structure

        u UAA           -   -      uaac 
uggugucc g   CUUACUACUGC CGC UUUACA    g
|||||||| |   ||||||||||| ||| ||||||     
aucgcagg C   GGAUGAUGACG GCG AAAUgu    u
        u UGC           A   U      ucga 

Annotation confidence Not enough data

Genome context

Unknown

Mature rlcv-miR-rL1-32-5p

• Accession: MIMAT0016957
• Description: Rhesus lymphocryptovirus rlcv-miR-rL1-32-5p mature miRNA
• Sequence: 11 - UAACUUACUACUGCCGCUUUACA - 33
• Evidence: experimental ; Northern [1], PCR [1], Illumina [2-3]

Mature rlcv-miR-rL1-32-3p

• Accession: MIMAT0016958
• Description: Rhesus lymphocryptovirus rlcv-miR-rL1-32-3p mature miRNA
• Sequence: 46 - UAAAUGCGAGCAGUAGUAGGCGUC - 69
• Evidence: experimental ; Northern [1], PCR [1], Illumina [2-3]

References

1. PubMed ID: 19889779
   A global analysis of evolutionary conservation among known and predicted gammaherpesvirus microRNAs
   "Walz N, Christalla T, Tessmer U, Grundhoff A"
   "J Virol (2010) 84:716-728


2. PubMed ID: 20219930
   Comprehensive analysis of Rhesus lymphocryptovirus microRNA expression
   "Riley KJ, Rabinowitz GS, Steitz JA"
   "J Virol (2010) 84:5148-5157


3. PubMed ID: 24257599
   Evolutionary conservation of primate lymphocryptovirus microRNA targets
   "Skalsky RL, Kang D, Linnstaedt SD, Cullen BR"
   "J Virol (2014) 88:1617-1635