miRBase entry: bma-mir-81

Stem-loop bma-mir-81


Accession
MI0013318
Description
Brugia malayi bma-mir-81 precursor miRNA
Gene family
MIPF0000153; bantam


Sequence

ggugggggcaguaggccuucaccaugaucuacagaaugcuaucauuuugagucUGAGAUCAUUGUGAAAGCUAUuugccuucuaccgucuc
(((((((((((..(((.(((((.(((((((.((((................))))))))))).))))).)))..))))).)))))).....

Structure
-----      -     ua   c     c       a    augcuau 
     gguggg ggcag  ggc uucac augaucu caga       c
     |||||| |||||  ||| ||||| ||||||| ||||        
     ccaucu ccguu  UCG AAGUG UACUAGA GUcu       a
cucug      u     UA   A     U       -    gaguuuu 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold36: 282673-282763 [-]

Database links

Mature bma-miR-81

Accession MIMAT0014093
Description Brugia malayi bma-miR-81 mature miRNA
Sequence 54 - UGAGAUCAUUGUGAAAGCUAU - 74
Evidence experimental
cloned [1], Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498