Stem-loop bma-mir-7

Accession

MI0013325

Description

Brugia malayi bma-mir-7 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

aaaaguuaaagcugaccaggUGGAAGACUUGUGAUUUUGUUGUuuauacauuuucagcaacagcaaauccgagcucuccacccggaggcau
..........(((..((.((((((.((((((.((((((((((((...........)))))))..))))))))).)))))))).)).)))..

Structure

aaaaguuaaa   ga  a      A  -    U     --       uaua 
          gcu  cc ggUGGA GA CUUG GAUUU  UGUUGUu    c
          |||  || |||||| || |||| |||||  |||||||    a
          cgg  gg ccaccu cu gagc cuaaa  acaacga    u
--------ua   -a  c      -  c    -     cg       cuuu 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold1: 2387985-2388075 [-]

Mature bma-miR-7

• Accession: MIMAT0014099
• Description: Brugia malayi bma-miR-7 mature miRNA
• Sequence: 21 - UGGAAGACUUGUGAUUUUGUUGU - 43
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498