Stem-loop bma-mir-50

Accession

MI0013330

Description

Brugia malayi bma-mir-50 precursor miRNA

Gene family

MIPF0000266; mir-50

Sequence

gcacuuccugcauaugcaguguUGAUAUGUCUGAUAUUCUUGGGUUgugcaaagucaaccagcaucucagacguaucggccacuguguauu
(((.....)))(((((((((((((((((((((((.((.((..(((((........))))))).)).))))))))))))).)))))))))).

Structure

gcacuuccugc          -             U  U  UG     ugc 
           auaugcagug uUGAUAUGUCUGA AU CU  GGUUg   a
           |||||||||| ||||||||||||| || ||  |||||    
           uaugugucac ggcuaugcagacu ua ga  ccaac   a
----------u          c             c  c  --     uga 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold79: 53411-53501 [-]

Mature bma-miR-50

• Accession: MIMAT0014104
• Description: Brugia malayi bma-miR-50 mature miRNA
• Sequence: 23 - UGAUAUGUCUGAUAUUCUUGGGUU - 46
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498