Stem-loop bma-mir-87b

Accession

MI0013336

Description

Brugia malayi bma-mir-87b precursor miRNA

Gene family

MIPF0000152; mir-87

Literature search

1 open access papers mention bma-mir-87b
(1 sentences)

Sequence

uucgcaaucccgccugacacucagucucaaccucugauguuaggaagGUGAGCAAAGUCUCAGGUGUcauugcggaaguuaccaaac
((((((((..(((((((.(((..(.((((.(((((.......)).))))))))..))).)))))))..))))))))...........

Structure

-----------        cc       c   ca u    a   -  ga 
           uucgcaau  cgccuga acu  g cuca ccu cu  u
           ||||||||  ||||||| |||  | |||| ||| ||  g
           aggcguua  GUGGACU UGA  C GAGU Gga gg  u
caaaccauuga        cU       C   AA -    -   a  au 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold4: 629946-630032 [+]

Mature bma-miR-87b

• Accession: MIMAT0014110
• Description: Brugia malayi bma-miR-87b mature miRNA
• Sequence: 48 - GUGAGCAAAGUCUCAGGUGU - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498