miRBase entry: bma-mir-234

Stem-loop bma-mir-234


Accession
MI0013344
Description
Brugia malayi bma-mir-234 precursor miRNA
Gene family
MIPF0000315; mir-234


Sequence

gguucgcuugggaauagguauucuccaguaaugacauugaaauugaagcgauugUUAUUGCUUGAGAAUACAaauugucaaagagaaccgaguaccugcca
(((((.(((((.(((..((((((((.(((((((((((((.........))).)))))))))).))))))))..))).)).))).)))))............

Structure
------------     g   -  g   ag        c          -   aaa 
            gguuc cuu gg aau  guauucuc aguaaugaca uug   u
            ||||| ||| || |||  |||||||| |||||||||| |||   u
            ccaag gaa cu uua  CAUAAGAG UCGUUAUUgu agc   g
accguccaugag     a   a  g   aA        U          u   gaa 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold10: 446828-446928 [+]

Database links

Mature bma-miR-234

Accession MIMAT0014118
Description Brugia malayi bma-miR-234 mature miRNA
Sequence 55 - UUAUUGCUUGAGAAUACA - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498