Stem-loop bma-mir-281

Accession

MI0013349

Description

Brugia malayi bma-mir-281 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

ggugaacgcagacgacaAAGAGAGCCAUCUGUUGACAGUcauauauugcaacUGUCAUGGAAUUGCUCUCUUUAcaugccuguguucuaag
...((((((((.((..(((((((((..(((((.((((((((.....))..)))))))))))...)))))))))...)).))))))))....

Structure

-ggu        a  -ac         -CA     U      --  u 
    gaacgcag cg   aAAGAGAGC   UCUGU GACAGU  ca a
    |||||||| ||   |||||||||   ||||| ||||||  || u
    cuuguguc gu   UUUCUCUCG   AGGUA CUGUca  gu a
gaau        c  acA         UUA     -      ac  u 

Annotation confidence Not enough data

Genome context

Bmal_v3_scaffold18: 454490-454580 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bma-mir-281

Mature bma-miR-281-3p

• Accession: MIMAT0014123
• Description: Brugia malayi bma-miR-281-3p mature miRNA
• Sequence: 53 - UGUCAUGGAAUUGCUCUCUUUA - 74
• Evidence: experimental ; Illumina [2]

Mature bma-miR-281-5p

• Accession: MIMAT0037378
• Description: Brugia malayi bma-miR-281-5p mature miRNA
• Sequence: 18 - AAGAGAGCCAUCUGUUGACAGU - 39
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 19874857
   Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
   "Poole CB, Davis PJ, Jin J, McReynolds LA"
   "Mol Biochem Parasitol (2010) 169:87-94


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498