miRBase entry: api-mir-1923

Stem-loop api-mir-1923


Accession
MI0013357
Description
Acyrthosiphon pisum api-mir-1923 precursor miRNA
Gene family
MIPF0000930; mir-1923


Sequence

aacuugccauuuaaaaugcuggcuucgauaacguuuuucaauaauauuuuaaugacuAAUCGCGUACCGUUGCACAGUCGUGGCgg
....((((((.......((((((..((...((((...(((.(((....))).)))......))))..))..)).)))).)))))).

Structure
aacu      uuaaaau    -  uu  aua    ---uuu   a   u 
    ugccau       gcug gc  cg   acgu      uca uaa a
    ||||||       |||| ||  ||   ||||      ||| |||  
    gCGGUG       UGAC CG  GC   UGCG      agu auu u
---g      ------C    A  UU  -CA    CUAAuc   a   u 


Annotation confidence Not enough data
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Genome context
GL349922.1: 6284-6369 [-]

Database links

Mature api-miR-1923

Accession MIMAT0014131
Description Acyrthosiphon pisum api-miR-1923 mature miRNA
Sequence 58 - AAUCGCGUACCGUUGCACAGUCGUGGC - 84
Evidence not_experimental

References

  1. Computational identification of microRNA homologs from Acyrthosiphon pisum (pea aphid)
    "Sathyamurthy G, Swamy NR"
    J Comp Intell Bioinf (2009) 2:109-119