Stem-loop rco-MIR159

Accession

MI0013378

Description

Ricinus communis rco-MIR159 precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

2 open access papers mention rco-MIR159
(4 sentences)

Sequence

gaguggagcuccuugaaguccaauagaggaucuugauggguagauugagcugcugagcuauggaucccacagcccuauaagcagagauuauaauuuuggauaggcuuguggcuugcauaucucaggagcuucauuaccuuguauuagauccuugUUUGGAUUGAAGGGAGCUCUAcaucu
((((((((((((((..(((((((..((((((((....((((((...(((((.(((((.((((.(..((((((.(((((...(((((.......))))).))))).))))))..).)))).))))).)))))..))))))......))))))))..)))))))..)))))))))))).)).

Structure

-  -            ga       ua        --ugau      auu     g     c    g uc      c     aag     au 
 ga guggagcuccuu  aguccaa  gaggaucu      ggguag   gagcu cugag uaug a  ccacag ccuau   cagag  u
 || ||||||||||||  |||||||  ||||||||      ||||||   ||||| ||||| |||| |  |||||| |||||   |||||  a
 cu cAUCUCGAGGGA  UUAGGUU  uuccuaga      uccauu   uucga gacuc auac u  gguguu ggaua   guuuu  u
u  a            AG       Ug        uuaugu      -ac     g     u    g uc      c     --g     aa 

Annotation confidence Not enough data

Genome context

EQ974757.1: 35526-35705 [-]

Mature rco-miR159

• Accession: MIMAT0014152
• Description: Ricinus communis rco-miR159 mature miRNA
• Sequence: 155 - UUUGGAUUGAAGGGAGCUCUA - 175
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995