Stem-loop rco-MIR166e

Accession

MI0013390

Description

Ricinus communis rco-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

2 open access papers mention rco-MIR166e
(5 sentences)

Sequence

ugaggggaauguugucuggcucgaggacucucuuuugaucccuuucaauuuucuccauagauccaauacggauauugggaguggguagaucauuugacagugucgUCGGACCAGGCUUCAUUCCCCccaau
((.((((((((..((((((.((((.(((.((.((.(((((...((((.....((((....((((.....))))....))))))))..)))))...)).)).))).)))).))))))..)))))))).))..

Structure

--  a        uu      c    g   u  c  --u     ccu    auuuu    auag    a 
  ug ggggaaug  gucugg ucga gac cu uu   ugauc   uuca     cucc    aucc a
  || ||||||||  |||||| |||| ||| || ||   |||||   ||||     ||||    |||| u
  ac CCCCUUAC  CGGACC GGCU cug ga ag   acuag   gggu     gagg    uagg a
ua  c        UU      A    g   u  c  uuu     -au    -----    guua    c 

Annotation confidence Not enough data

Genome context

EQ974167.1: 24073-24203 [+]

Mature rco-miR166e

• Accession: MIMAT0014164
• Description: Ricinus communis rco-miR166e mature miRNA
• Sequence: 106 - UCGGACCAGGCUUCAUUCCCC - 126
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995