Stem-loop rco-MIR167a

Accession

MI0013391

Description

Ricinus communis rco-MIR167a precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

2 open access papers mention rco-MIR167a
(17 sentences)

Sequence

aaaggUGAAGCUGCCAGCAUGAUCUAgcuuugguuagugagacagcugaaagaaagauacagauaacacaugguaucuaagcaauagugcuaacccuagcuaggucaugcucugacagccucacuccuuc
...(((((.(((((.((((((((((((((..((((((((.....(((.......((((((............)))))).))).....))))))))..))))))))))))))..).)))).))))).....

Structure

--aaa     A    - -C              uu        agaca   gaaagaa      agaua 
     ggUGA GCUG C  AGCAUGAUCUAgcu  gguuagug     gcu       agauac     a
     ||||| |||| |  ||||||||||||||  ||||||||     |||       ||||||      
     ucacu cgac g  ucguacuggaucga  ccaaucgu     cga       ucuaug     c
cuucc     c    a uc              uc        gauaa   ------a      guaca 

Annotation confidence Not enough data

Genome context

EQ973866.1: 140822-140951 [+]

Mature rco-miR167a

• Accession: MIMAT0014165
• Description: Ricinus communis rco-miR167a mature miRNA
• Sequence: 6 - UGAAGCUGCCAGCAUGAUCUA - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995