miRBase entry: rco-MIR167c

Stem-loop rco-MIR167c


Accession
MI0013393
Description
Ricinus communis rco-MIR167c precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
2 open access papers mention rco-MIR167c
(18 sentences)

Sequence

auaguUGAAGCUGCCAGCAUGAUCUGGagcuuuucuauccaggagagacuagaucauguggcaguuucaccuguug
((((.(((((((((((.((((((((((..(((((((....))))))).))))))))))))))))))))).))))..

Structure
--    u           G          ag       a 
  auag UGAAGCUGCCA CAUGAUCUGG  cuuuucu u
  |||| ||||||||||| ||||||||||  |||||||  
  uguc acuuugacggu guacuagauc  gagagga c
gu    c           -          -a       c 


Annotation confidence Not enough data
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Genome context
EQ973777.1: 23860-23935 [-]

Database links

Mature rco-miR167c

Accession MIMAT0014167
Description Ricinus communis rco-miR167c mature miRNA
Sequence 6 - UGAAGCUGCCAGCAUGAUCUGG - 27
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995