Stem-loop rco-MIR171e

Accession

MI0013402

Description

Ricinus communis rco-MIR171e precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171e
(9 sentences)

Sequence

ggggauguuggaauggcucaaucaaaucaaaucucccaaaguuuuggguccuuuaaucUGAUUGAGCCGUGCCAAUAUCcccca
(((((((((((.((((((((((((.((.(((...(((((....)))))...))).)).)))))))))))).)))))))))))..

Structure

--           a            a  c   ucu     a 
  ggggauguugg auggcucaauca au aaa   cccaa g
  ||||||||||| |||||||||||| || |||   |||||  
  cccCUAUAACC UGCCGAGUUAGU ua uuu   ggguu u
ac           G            c  a   ccu     u 

Annotation confidence Not enough data

Genome context

EQ973773.1: 2233794-2233877 [-]

Mature rco-miR171e

• Accession: MIMAT0014176
• Description: Ricinus communis rco-miR171e mature miRNA
• Sequence: 59 - UGAUUGAGCCGUGCCAAUAUC - 79
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995