miRBase entry: rco-MIR171g

Stem-loop rco-MIR171g


Accession
MI0013404
Description
Ricinus communis rco-MIR171g precursor miRNA
Gene family
MIPF0000030; MIR171_1

Literature search
3 open access papers mention rco-MIR171g
(9 sentences)

Sequence

agcgauguuggugagguucaauccgaagacggauuuacacauucuguuguaaaggacgaucucAGAUUGAGCCGCGCCAAUAUCacuuu
((.((((((((((.(((((((((.((.((((..((((((........))))))...)).)))).))))))))).)))))))))).))..

Structure
--  c          a         c  a  -  -ga      cau 
  ag gauguuggug gguucaauc ga ga cg   uuuaca   u
  || |||||||||| ||||||||| || || ||   ||||||    
  uc CUAUAACCGC CCGAGUUAG cu cu gc   aaaugu   c
uu  a          G         A  -  a  agg      ugu 


Annotation confidence Not enough data
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Genome context
EQ974034.1: 63328-63416 [-]

Database links

Mature rco-miR171g

Accession MIMAT0014178
Description Ricinus communis rco-miR171g mature miRNA
Sequence 64 - AGAUUGAGCCGCGCCAAUAUC - 84
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995