Stem-loop rco-MIR390a

Accession

MI0013410

Description

Ricinus communis rco-MIR390a precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

2 open access papers mention rco-MIR390a
(26 sentences)

Sequence

cuguuAAGCUCAGGAGGGAUAGCGCCgugaagaucauugauauauuauuguccaaacaaaacauauguauagucuuuaguggcgcuauccauccugaguuucacaggu
((((.((((((((((.((((((((((((((((((.....((((((..((((....))))...))))))...))))))).))))))))))).)))))))))).))))..

Structure

--    u          G           -       cauug      -ua    c 
  cugu AAGCUCAGGA GGAUAGCGCCg ugaagau     auauau   uugu c
  |||| |||||||||| ||||||||||| |||||||     ||||||   ||||  
  gaca uuugaguccu ccuaucgcggu auuucug     uguaua   aaca a
ug    c          a           g       --aua      caa    a 

Annotation confidence Not enough data

Genome context

EQ973804.1: 921964-922071 [+]

Mature rco-miR390a

• Accession: MIMAT0014184
• Description: Ricinus communis rco-miR390a mature miRNA
• Sequence: 6 - AAGCUCAGGAGGGAUAGCGCC - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995