Stem-loop rco-MIR399e

Accession

MI0013426

Description

Ricinus communis rco-MIR399e precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

2 open access papers mention rco-MIR399e
(8 sentences)

Sequence

uuacagggcaaauaucuccauuggcagguagccacuuuagacaugcauuuaaauuuugagcauuauuuaacagugugccuucUGCCAAAGGAGAUUUGCCCAGcaauu
.....((((((..((((((.((((((((..(((((((((((.((((.((........))))))..))))).)))).))..)))))))).)))))))))))).......

Structure

--uuaca      au      a        ua  -    -     -c    a  uaa 
       gggcaa  aucucc uuggcagg  gc cacu uuaga  augc uu   a
       ||||||  |||||| ||||||||  || |||| |||||  |||| ||    
       CCCGUU  UAGAGG AACCGUcu  cg guga aauuu  uacg ag   u
uuaacGA      --      A        uc  u    c     au    -  uuu 

Annotation confidence Not enough data

Genome context

EQ973891.1: 152225-152332 [-]

Mature rco-miR399e

• Accession: MIMAT0014200
• Description: Ricinus communis rco-miR399e mature miRNA
• Sequence: 83 - UGCCAAAGGAGAUUUGCCCAG - 103
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995