miRBase entry: cqu-mir-133

Stem-loop cqu-mir-133


Accession
MI0013625
Description
Culex quinquefasciatus cqu-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

cuucaccgaacaguagcugguugacuucgggucaaaucgacaaauauuugcaaagauauuuccuuugagaaaucauUUGGUCCCCUUCAACCAGCUGUggacgguugauugauu
..((((((..((.(((((((((((....((((((((((((.((((((((....))))))))...)))).......))))).)))..)))))))))))))..))).)))......

Structure
----cu   -   aa  g           cuuc   -     -------    --c        g 
      uca ccg  ca uagcugguuga    ggg ucaaa       ucga   aaauauuu c
      ||| |||  || |||||||||||    ||| |||||       ||||   ||||||||  
      agu ggc  gU GUCGACCAACU    CCC GGUUu       aguu   uuuauaga a
uuaguu   u   ag  -           --UC   U     acuaaag    ucc        a 


Annotation confidence Not enough data
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Genome context
supercont3.1189: 55672-55785 [+]

Database links

Mature cqu-miR-133

Accession MIMAT0014437
Description Culex quinquefasciatus cqu-miR-133 mature miRNA
Sequence 77 - UUGGUCCCCUUCAACCAGCUGU - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119