miRBase entry: tgu-mir-2977

Stem-loop tgu-mir-2977


Accession
MI0013675
Description
Taeniopygia guttata tgu-mir-2977 precursor miRNA


Sequence

caagcuggcuacaauguguggguuugugggcucaaagcuugucgcuuucgaaggaGCUGAACCCUAGAGCCUGGCAcugugguauug
.......((((((.(((..((((((..(((.(((..((((.(((....)))..))))))).)))..)))))).))).))))))....

Structure
caagcug      a   gu      gu   c   aa    -g   c 
       gcuaca ugu  ggguuu  ggg uca  gcuu  ucg u
       |||||| |||  ||||||  ||| |||  ||||  |||  
       uggugu ACG  UCCGAG  CCC AGU  CGag  agc u
---guua      c   -G      AU   A   --    ga   u 


Annotation confidence Not enough data
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Genome context
chr1: 48213234-48213320 [-]

Database links

Mature tgu-miR-2977

Accession MIMAT0014487
Description Taeniopygia guttata tgu-miR-2977 mature miRNA
Sequence 56 - GCUGAACCCUAGAGCCUGGCA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20360741
    The genome of a songbird
    "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
    "Nature (2010) 464:757-762