miRBase entry: tgu-mir-2982

Stem-loop tgu-mir-2982


Accession
MI0013680
Description
Taeniopygia guttata tgu-mir-2982 precursor miRNA


Sequence

ccugguagguggcUGUGGAGGGAGGGCUUGGGAugccgggaccaucccaggaccccguuccauggcccugcuuguccccauuucccacggcagccaccuacgugaagg
....((((((((((((.(.((((((....(((((((.(((.((((....(((......)))))))))).))..)))))..)))))).).)))))))))))).......

Structure
---ccug            G A      GCUU     --  c   a    ccca   cc 
       guagguggcUGU G GGGAGG    GGGAu  gc ggg ccau    gga  c
       |||||||||||| | ||||||    |||||  || ||| ||||    |||   
       cauccaccgacg c cccuuu    cccug  cg ccc ggua    ccu  c
ggaagug            g a      --ac     uu  u   -    ----   ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr23_random: 143904-144011 [-]

Database links

Mature tgu-miR-2982

Accession MIMAT0014492
Description Taeniopygia guttata tgu-miR-2982 mature miRNA
Sequence 14 - UGUGGAGGGAGGGCUUGGGA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20360741
    The genome of a songbird
    "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
    "Nature (2010) 464:757-762