miRBase entry: tgu-mir-2996-1

Stem-loop tgu-mir-2996-1


Accession
MI0013828
Description
Taeniopygia guttata tgu-mir-2996-1 precursor miRNA
Gene family
MIPF0001023; mir-2996


Sequence

agcagcagggcugaaauaucugucuugggcaucucuuaugCCUUCCAGAGGUUUCUUCUGAGaacauugaac
.....(((((..(((((.((((....((((((.....))))))..)))).))))))))))............

Structure
-------agcag     cu     a    ucuu      c 
            caggg  gaaau ucug    gggcau u
            |||||  ||||| ||||    |||||| c
            GUCUU  CUUUG AGAC    UCCgua u
caaguuacaaGA     --     G    --CU      u 


Annotation confidence Not enough data
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Genome context
chrZ: 4571576-4571647 [-]

Database links

Mature tgu-miR-2996

Accession MIMAT0014600
Description Taeniopygia guttata tgu-miR-2996 mature miRNA
Sequence 41 - CCUUCCAGAGGUUUCUUCUGAG - 62
Evidence experimental
454 [1]

References

  1. PubMed ID: 20360741
    The genome of a songbird
    "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
    "Nature (2010) 464:757-762