miRBase entry: bmo-mir-2999

Stem-loop bmo-mir-2999


Accession
MI0013855
Description
Bombyx mori bmo-mir-2999 precursor miRNA

Literature search
1 open access papers mention bmo-mir-2999
(1 sentences)

Sequence

208 reads, 71 reads per million, 3 experiments
cgcccgcgcggCUGCGACGGACUAGACGCGCAuuuuccucgggcugcuguugaaccuugcgcaguuucaguuauuuguuuaguuauuguuuuaguuauuacguuguggggg
(.((((((((((((.(((((((((((((((((..(((..(((....)))..)))...)))))..............))))))))..)))).)))).....)).)))))).)

Structure
 g      -  -----    C    --        --------------     -uu   cu   g 
c cccgcg cg     gCUG GACG  GACUAGAC              GCGCA   uuc  cgg c
| |||||| ||     |||| ||||  ||||||||              |||||   |||  |||  
g gggugu gc     ugau uugu  uugauuug              cgcgu   aag  guc u
 g      u  auuau    u    ua        uuuauugacuuuga     ucc   uu   g 


Annotation confidence Not enough data
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Genome context
NW_004581688.1: 951610-951720 [+]

Database links

Mature bmo-miR-2999

Accession MIMAT0014660
Description Bombyx mori bmo-miR-2999 mature miRNA
Sequence 12 - CUGCGACGGACUAGACGCGCA - 32
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20089182
    Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
    Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
    BMC Genomics (2010) 11:52