Stem-loop hma-mir-3003b

Accession

MI0013864

Description

Hydra magnipapillata hma-mir-3003b precursor miRNA

Gene family

MIPF0000818; mir-3003

Sequence

ugcuauuuauaucaUUACCAGUGUGCACAUUUAACauuauugUUAAAUGUGCGAACUGGUAAUGaaauaaauacug
...(((((((.(((((((((((.(((((((((((((....))))))))))))).))))))))))).)))))))...

Structure

ugc       a           G             u 
   uauuuau ucaUUACCAGU UGCACAUUUAACa u
   ||||||| ||||||||||| |||||||||||||  
   auaaaua aGUAAUGGUCA GCGUGUAAAUUgu a
guc       a           A             u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hma-miR-3003b-5p

• Accession: MIMAT0014669
• Description: Hydra magnipapillata hma-miR-3003b-5p mature miRNA
• Sequence: 15 - UUACCAGUGUGCACAUUUAAC - 35
• Evidence: experimental ; 454 [1]

Mature hma-miR-3003b-3p

• Accession: MIMAT0014670
• Description: Hydra magnipapillata hma-miR-3003b-3p mature miRNA
• Sequence: 43 - UUAAAUGUGCGAACUGGUAAUG - 64
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20228792
   The dynamic genome of Hydra
   "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
   "Nature (2010) 464:592-596