miRBase entry: hma-mir-3010

Stem-loop hma-mir-3010


Accession
MI0013871
Description
Hydra magnipapillata hma-mir-3010 precursor miRNA


Sequence

aaaaucuaggcaaauuuauuuaugcgcucugauuuaaaaaUGAGAGCGCAAAAAUAAAUUUGcauagaauu
....((((.((((((((((((.((((((((.(((....))).)))))))).)))))))))))).))))...

Structure
aaaa    g            a        g   u 
    ucua gcaaauuuauuu ugcgcucu auu a
    |||| |||||||||||| |||||||| |||  
    agau cGUUUAAAUAAA ACGCGAGA Uaa a
-uua    a            A        G   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hma-miR-3010

Accession MIMAT0014678
Description Hydra magnipapillata hma-miR-3010 mature miRNA
Sequence 41 - UGAGAGCGCAAAAAUAAAUUUG - 62
Evidence experimental
454 [1]

References

  1. PubMed ID: 20228792
    The dynamic genome of Hydra
    "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
    "Nature (2010) 464:592-596