miRBase entry: hma-mir-3012a

Stem-loop hma-mir-3012a


Accession
MI0013873
Description
Hydra magnipapillata hma-mir-3012a precursor miRNA
Gene family
MIPF0001018; mir-3012


Sequence

aaggaaaaacuuucugcaaauccacuaaugcuuuuauucaUCAGUGGAUUUGUAGAAAGCUUUaccag
..((.(((.(((((((((((((((((.(((........))).))))))))))))))))).))).))..

Structure
aa  a   a                 a   cuu 
  gg aaa cuuucugcaaauccacu aug   u
  || ||| ||||||||||||||||| |||    
  cc UUU GAAAGAUGUUUAGGUGA Uac   u
ga  a   C                 C   uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hma-miR-3012a

Accession MIMAT0014680
Description Hydra magnipapillata hma-miR-3012a mature miRNA
Sequence 41 - UCAGUGGAUUUGUAGAAAGCUUU - 63
Evidence experimental
454 [1]

References

  1. PubMed ID: 20228792
    The dynamic genome of Hydra
    "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
    "Nature (2010) 464:592-596