miRBase entry: hma-mir-3012b

Stem-loop hma-mir-3012b


Accession
MI0013874
Description
Hydra magnipapillata hma-mir-3012b precursor miRNA
Gene family
MIPF0001018; mir-3012


Sequence

gaaggaaaaacuuucuguauauccacuaaugcuuucaUCAGUGGAUUUGUAGAAAGUUUUAccaau
...((.(((((((((((((.(((((((.(((....))).))))))).))))))))))))).))...

Structure
gaa  a             u       a   c 
   gg aaaacuuucugua auccacu aug u
   || ||||||||||||| ||||||| |||  
   cc UUUUGAAAGAUGU UAGGUGA Uac u
uaa  A             U       C   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hma-miR-3012b

Accession MIMAT0014681
Description Hydra magnipapillata hma-miR-3012b mature miRNA
Sequence 38 - UCAGUGGAUUUGUAGAAAGUUUUA - 61
Evidence experimental
454 [1]

References

  1. PubMed ID: 20228792
    The dynamic genome of Hydra
    "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
    "Nature (2010) 464:592-596