Stem-loop hsv1-mir-H12

Accession

MI0013886

Description

Herpes Simplex Virus 1 hsv1-mir-H12 precursor miRNA

Gene family

MIPF0000833; mir-H11

Sequence

ggagucgggcacggcgccagugcucgcacuucgcccuaauaauauauauauaUUGGGACGAAGUGCGAACGCUUcgcguucucacuuc
(((((.(((.(((.((..((((.((((((((((.(((((((.........))))))).)))))))))).)))).))))).))))))))

Structure

     c   c   g  cc    c          c       aua 
ggagu ggg acg cg  agug ucgcacuucg ccuaaua   u
||||| ||| ||| ||  |||| |||||||||| |||||||   a
cuuca cuc ugc gc  UCGC AGCGUGAAGC GGGUUau   u
     -   u   -  -U    A          A       aua 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H12

• Accession: MIMAT0014689
• Description: Herpes Simplex Virus 1 hsv1-miR-H12 mature miRNA
• Sequence: 53 - UUGGGACGAAGUGCGAACGCUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672