Stem-loop hsv1-mir-H13

Accession

MI0013887

Description

Herpes Simplex Virus 1 hsv1-mir-H13 precursor miRNA

Gene family

MIPF0000833; mir-H11

Sequence

gcgaagcguucgcacuucgucccaauauauauauauuaUUAGGGCGAAGUGCGAGCACUGGcgc
(((.((.(((((((((((((((.((((.........)))).))))))))))))))).))..)))

Structure

   -a  c               c    uau 
gcg  ag guucgcacuucgucc aaua   a
|||  || ||||||||||||||| ||||   u
cgc  UC CGAGCGUGAAGCGGG UUau   a
   GG  A               A    uau 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H13

• Accession: MIMAT0014690
• Description: Herpes Simplex Virus 1 hsv1-miR-H13 mature miRNA
• Sequence: 39 - UUAGGGCGAAGUGCGAGCACUGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672