Stem-loop hsv1-mir-H15

Accession

MI0013889

Description

Herpes Simplex Virus 1 hsv1-mir-H15 precursor miRNA

Sequence

accacagcgcaugcgccgggccguuguggggccccgggccggggccccuuggguccgccggGGCCCCGGGCCGGGCCGCCACGggggccggccguuggcggu
(((.(((((.....(((((.((.(((((((((((.((.((((((((((..((.....)))))))))))).))))))).)))))).))))))))))))..)))

Structure

   -a     caugc     g  g      -     c  g          uu  g 
acc  cagcg     gccgg cc uugugg ggccc gg ccggggcccc  gg u
|||  |||||     ||||| || |||||| ||||| || ||||||||||  || c
ugg  guugc     cggcc gg gGCACC CCGGG CC GGCCCCGGgg  cc c
   cg     -----     -  g      G     -  G          --  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H15

• Accession: MIMAT0014693
• Description: Herpes Simplex Virus 1 hsv1-miR-H15 mature miRNA
• Sequence: 62 - GGCCCCGGGCCGGGCCGCCACG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672