miRBase entry: hsv1-mir-H18

Stem-loop hsv1-mir-H18


Accession
MI0013892
Description
Herpes Simplex Virus 1 hsv1-mir-H18 precursor miRNA


Sequence

cgguCCCGCCCGCCGGACGCCGGGACCaacgggacggcgggcggcccaagggccgcccgccuugccgcccccccauuggccggcgggcgggaccg
((((((((((((((((.....(((.....(((.(.(((((((((((....))))))))))).).)))....))).....))))))))))))))))

Structure
                ACGCC   ACCaa   g c           c 
cgguCCCGCCCGCCGG     GGG     cgg a ggcgggcggcc a
||||||||||||||||     |||     ||| | |||||||||||  
gccagggcgggcggcc     ccc     gcc u ccgcccgccgg a
                gguua   -cccc   g u           g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Disease association
hsv1-mir-H18 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsv1-miR-H18

Accession MIMAT0014696
Description Herpes Simplex Virus 1 hsv1-miR-H18 mature miRNA
Sequence 5 - CCCGCCCGCCGGACGCCGGGACC - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20181707
    Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
    "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
    "J Virol (2010) 84:4659-4672