Stem-loop hsv2-mir-H20

Accession

MI0013902

Description

Herpes Simplex Virus 2 hsv2-mir-H20 precursor miRNA

Gene family

MIPF0001760; mir-H20

Sequence

ggacagggggggagacgaggggucggaauccaaaggacgcagaccaccUUUGGUUACGGACCCCUUUCUcccccccuucc
(((.(((((((((((.((((((((.(...(((((((..........)))))))...).))))))))))))))))))))))

Structure

   c           c        g aau       acgc 
gga agggggggaga gagggguc g   ccaaagg    a
||| ||||||||||| |||||||| |   |||||||     
ccu ucccccccUCU UUCCCCAG C   GGUUUcc    g
   -           -        G AUU       acca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H20

• Accession: MIMAT0014702
• Description: Herpes Simplex Virus 2 hsv2-miR-H20 mature miRNA
• Sequence: 49 - UUUGGUUACGGACCCCUUUCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672