miRBase entry: hsv2-mir-H21

Stem-loop hsv2-mir-H21


Accession
MI0013903
Description
Herpes Simplex Virus 2 hsv2-mir-H21 precursor miRNA


Sequence

guuuguuucguccgaacccaugcgccuccaucgagAUAACGUCAUGCUGUCUACGGaaccagac
(((((((((((..((...((((((.(((....)))....)).))))...)).)))))).)))))

Structure
     -      cc  acc    -  ---c   c 
guuug uuucgu  ga   caug cg    cuc a
||||| ||||||  ||   |||| ||    |||  
cagac aaGGCA  CU   GUAC GC    gag u
     c      -U  GUC    U  AAUA   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hsv2-miR-H21

Accession MIMAT0014703
Description Herpes Simplex Virus 2 hsv2-miR-H21 mature miRNA
Sequence 36 - AUAACGUCAUGCUGUCUACGG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20181707
    Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
    "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
    "J Virol (2010) 84:4659-4672