Stem-loop hsv2-mir-H22

Accession

MI0013904

Description

Herpes Simplex Virus 2 hsv2-mir-H22 precursor miRNA

Sequence

ccccAGGGGUCUGGACGUGGGUGGGCgcggggagcgcggggacgaccgggcccgagccuucuccguccccccugggg
(((((((((...(((((.(((.((((.(((...((.(((......))).))))).)))).)))))))))))))))))

Structure

         UCU     U   U    g   gga  g   gg 
ccccAGGGG   GGACG GGG GGGC cgg   gc cgg  a
|||||||||   ||||| ||| |||| |||   || |||   
ggggucccc   ccugc cuc uccg gcc   cg gcc  c
         ---     -   u    a   ---  g   ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H22

• Accession: MIMAT0014704
• Description: Herpes Simplex Virus 2 hsv2-miR-H22 mature miRNA
• Sequence: 5 - AGGGGUCUGGACGUGGGUGGGC - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672