miRBase entry: api-mir-307

Stem-loop api-mir-307


Accession
MI0013930
Description
Acyrthosiphon pisum api-mir-307 precursor miRNA
Gene family
MIPF0000293; mir-67

Literature search
1 open access papers mention api-mir-307
(2 sentences)

Sequence

acucacucaauuuggaugugauguucaaauuggcgccaCCACAACCUCCUUGAGUGAGCGA
.(((((((((...((.((((.((.(((...)))...)).)))).))...)))))))))...

Structure
--a         uuu  a    a  --u   a 
   cucacucaa   gg ugug ug   uca  
   |||||||||   || |||| ||   ||| a
   GAGUGAGUU   CC ACAC ac   ggu  
AGC         CCU  A    C  cgc   u 


Annotation confidence Not enough data
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Genome context
GL350510.1: 73409-73469 [-]

Database links

Mature api-miR-307

Accession MIMAT0014729
Description Acyrthosiphon pisum api-miR-307 mature miRNA
Sequence 39 - CCACAACCUCCUUGAGUGAGCGA - 61
Evidence

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281