miRBase entry: api-mir-7

Stem-loop api-mir-7


Accession
MI0013936
Description
Acyrthosiphon pisum api-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
1 open access papers mention api-mir-7
(7 sentences)

Sequence

UGGAAGACUAGUGAUUUUGUUGUUuuaaaaaaaaaguauuuuccuaacaagaagucucuagucuucuuac
.((((((((((.((((((.(((((...((((.......))))...))))))))))).))))))))))...

Structure
--U          U      G     uua    aa 
   GGAAGACUAG GAUUUU UUGUU   aaaa  a
   |||||||||| |||||| |||||   ||||  a
   ucuucugauc cugaag aacaa   uuuu  g
cau          u      -     ucc    au 


Annotation confidence Not enough data
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Genome context
GL349691.1: 921851-921920 [+]

Database links

Mature api-miR-7

Accession MIMAT0014734
Description Acyrthosiphon pisum api-miR-7 mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281