miRBase entry: api-mir-3015a-2

Stem-loop api-mir-3015a-2


Accession
MI0013957
Description
Acyrthosiphon pisum api-mir-3015a-2 precursor miRNA
Gene family
MIPF0001111; mir-3015


Sequence

uuucuuacaaugucaaaauuaaccgacacuUUACUGGACAUUGUAAGAACGG
.(((((((((((((......................)))))))))))))...

Structure
--u             aaaauuaacc 
   uucuuacaauguc          g
   |||||||||||||           
   AAGAAUGUUACAG          a
GGC             GUCAUUucac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL350299.1: 69452-69503 [+]

Database links

Mature api-miR-3015a

Accession MIMAT0014750
Description Acyrthosiphon pisum api-miR-3015a mature miRNA
Sequence 31 - UUACUGGACAUUGUAAGAACGG - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281