miRBase entry: api-mir-3023

Stem-loop api-mir-3023


Accession
MI0013966
Description
Acyrthosiphon pisum api-mir-3023 precursor miRNA


Sequence

ggcauuucuguuuucaagccuuauuaaaauuuuaaaauAAGCUUGAUUUCAGAAAUGUCGA
((((((((((...((((((.(((((..........)))))))))))...))))))))))..

Structure
--          uuu      c     aaaa 
  ggcauuucug   ucaagc uuauu    u
  ||||||||||   |||||| |||||     
  CUGUAAAGAC   AGUUCG AAuaa    u
AG          UUU      -     aauu 


Annotation confidence Not enough data
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Genome context
GL350151.1: 170256-170316 [-]

Database links

Mature api-miR-3023

Accession MIMAT0014759
Description Acyrthosiphon pisum api-miR-3023 mature miRNA
Sequence 39 - AAGCUUGAUUUCAGAAAUGUCGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281